Publicaciones (69) Publicaciones de Jorge González Domínguez

2024

  1. Applying dynamic balancing to improve the performance of MPI parallel genomics applications

    Proceedings of the ACM Symposium on Applied Computing

  2. BigDEC: A multi-algorithm Big Data tool based on the k-mer spectrum method for scalable short-read error correction

    Future Generation Computer Systems, Vol. 154, pp. 314-329

  3. CUDA acceleration of MI-based feature selection methods

    Journal of Parallel and Distributed Computing, Vol. 190

  4. PARamrfinder: detecting allele-specific DNA methylation on multicore clusters

    Journal of Supercomputing, Vol. 80, Núm. 10, pp. 14573-14599

  5. bioScience: A new python science library for high-performance computing bioinformatics analytics

    SoftwareX, Vol. 26

2023

  1. Influence of face-to-face in hybrid teaching: A case of study for a master

    Iberian Conference on Information Systems and Technologies, CISTI

  2. PATO: genome-wide prediction of lncRNA-DNA triple helices

    Bioinformatics (Oxford, England), Vol. 39, Núm. 3

  3. ParRADMeth: Identification of Differentially Methylated Regions on Multicore Clusters

    IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 20, Núm. 3, pp. 2041-2049

  4. Parallel construction of RNA databases for extensive lncRNA-RNA interaction prediction

    Proceedings of the ACM Symposium on Applied Computing

  5. pRIblast: A highly efficient parallel application for comprehensive lncRNA–RNA interaction prediction

    Future Generation Computer Systems, Vol. 138, pp. 270-279

2022

  1. A SIMD algorithm for the detection of epistatic interactions of any order

    Future Generation Computer Systems, Vol. 132, pp. 108-123

  2. Evaluation of Existing Methods for High-Order Epistasis Detection

    IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 19, Núm. 2, pp. 912-926

  3. Fiuncho: a program for any-order epistasis detection in CPU clusters

    Journal of Supercomputing, Vol. 78, Núm. 13, pp. 15338-15357

  4. MPI-dot2dot: A parallel tool to find DNA tandem repeats on multicore clusters

    Journal of Supercomputing, Vol. 78, Núm. 3, pp. 4217-4235

  5. Parallel-FST: A feature selection library for multicore clusters

    Journal of Parallel and Distributed Computing, Vol. 169, pp. 106-116

  6. PyToxo: a Python tool for calculating penetrance tables of high-order epistasis models

    BMC Bioinformatics, Vol. 23, Núm. 1

2021

  1. A Parallel Tool for the Identification of Differentially Methylated Regions in Genomic Analyses †

    Engineering Proceedings, Vol. 7, Núm. 1

  2. Fast and Accurate Multiple Sequence Alignment with MSAProbs-MPI

    Methods in molecular biology (Clifton, N.J.), Vol. 2231, pp. 39-47

  3. ScalaParBiBit: scaling the binary biclustering in distributed-memory systems

    Cluster Computing, Vol. 24, Núm. 3, pp. 2249-2268

2020

  1. CUDA-JMI: Acceleration of feature selection on heterogeneous systems

    Future Generation Computer Systems, Vol. 102, pp. 426-436