CITIC - Centro de Investigación de Tecnoloxías da Información e da Comunicación
Centro de Investigación e Campus de Especialización
Kiel University
Kiel, AlemaniaPublicacións en colaboración con investigadores/as de Kiel University (8)
2016
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Combining GPU and FPGA Technology for Efficient Exhaustive Interaction Analysis in GWAS
2016 IEEE 27TH INTERNATIONAL CONFERENCE ON APPLICATION-SPECIFIC SYSTEMS, ARCHITECTURES AND PROCESSORS (ASAP)
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Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS
Proceedings of the International Conference on Application-Specific Systems, Architectures and Processors
2015
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High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs
Journal of Computational Science, Vol. 9, pp. 131-136
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Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model
International Journal of High Performance Computing Applications, Vol. 29, Núm. 4, pp. 506-510
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Parallelizing epistasis detection in GWAS on FPGA and GPU-accelerated computing systems
IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 12, Núm. 5, pp. 982-994
2014
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FPGA-based acceleration of detecting statistical epistasis in GWAS
Procedia Computer Science
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Hybrid CPU/GPU acceleration of detection of 2-SNP epistatic interactions in GWAS
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
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UPC++ for bioinformatics: A case study using genome-wide association studies
2014 IEEE International Conference on Cluster Computing, CLUSTER 2014