Publications in collaboration with researchers from Kiel University (8)

2016

  1. Combining GPU and FPGA Technology for Efficient Exhaustive Interaction Analysis in GWAS

    2016 IEEE 27TH INTERNATIONAL CONFERENCE ON APPLICATION-SPECIFIC SYSTEMS, ARCHITECTURES AND PROCESSORS (ASAP)

  2. Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS

    Proceedings of the International Conference on Application-Specific Systems, Architectures and Processors

2015

  1. High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs

    Journal of Computational Science, Vol. 9, pp. 131-136

  2. Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model

    International Journal of High Performance Computing Applications, Vol. 29, Núm. 4, pp. 506-510

  3. Parallelizing epistasis detection in GWAS on FPGA and GPU-accelerated computing systems

    IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 12, Núm. 5, pp. 982-994

2014

  1. FPGA-based acceleration of detecting statistical epistasis in GWAS

    Procedia Computer Science

  2. Hybrid CPU/GPU acceleration of detection of 2-SNP epistatic interactions in GWAS

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

  3. UPC++ for bioinformatics: A case study using genome-wide association studies

    2014 IEEE International Conference on Cluster Computing, CLUSTER 2014