Publications in collaboration with researchers from University of Helsinki (5)

2023

  1. ViQUF: De Novo Viral Quasispecies Reconstruction Using Unitig-Based Flow Networks

    IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 20, Núm. 2, pp. 1550-1562

2021

  1. Inference of viral quasispecies with a paired de bruijn graph

    Bioinformatics, Vol. 37, Núm. 4, pp. 473-481

2015

  1. Faster Compressed Quadtrees

    Data Compression Conference Proceedings

2012

  1. Approximate all-pairs suffix/prefix overlaps

    Information and Computation, Vol. 213, pp. 49-58

2010

  1. Approximate all-pairs suffix/prefix overlaps

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)