Publications by the researcher in collaboration with Roberto Rey Expósito (11)

2024

  1. BigDEC: A multi-algorithm Big Data tool based on the k-mer spectrum method for scalable short-read error correction

    Future Generation Computer Systems, Vol. 154, pp. 314-329

2022

  1. MPI-dot2dot: A parallel tool to find DNA tandem repeats on multicore clusters

    Journal of Supercomputing, Vol. 78, Núm. 3, pp. 4217-4235

2020

  1. CUDA-JMI: Acceleration of feature selection on heterogeneous systems

    Future Generation Computer Systems, Vol. 102, pp. 426-436

  2. SMusket: Spark-based DNA error correction on distributed-memory systems

    Future Generation Computer Systems, Vol. 111, pp. 698-713

  3. SeQual: Big Data Tool to Perform Quality Control and Data Preprocessing of Large NGS Datasets

    IEEE Access, Vol. 8, pp. 146075-146084

2019

  1. Accelerating binary biclustering on platforms with CUDA-enabled GPUs

    Information Sciences, Vol. 496, pp. 317-325

  2. HPC Tools to Deal with Microarray Data

    Methods in Molecular Biology (Humana Press Inc.), pp. 227-243

2018

  1. HSRA: Hadoop-based spliced read aligner for RNA sequencing data

    PLoS ONE, Vol. 13, Núm. 7

2017

  1. MarDRe: efficient MapReduce-based removal of duplicate DNA reads in the cloud

    Bioinformatics (Oxford, England), Vol. 33, Núm. 17, pp. 2762-2764

2013

  1. Analysis of I/O Performance on an Amazon EC2 Cluster Compute and High I/O Platform

    Journal of Grid Computing, Vol. 11, Núm. 4, pp. 613-631

  2. The Servet 3.0 benchmark suite: Characterization of network performance degradation

    Computers and Electrical Engineering